Carnation DB

Dca50844.1

Annotation

5-exons
f-1
sp|C6TH02_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0016021;GO:0006810#0F1P1C
AT1G26690.1 | Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr1:9224299-9225682 REVERSE LENGTH=214
Repeat List (scaffold6503)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50844.1	156	354	354	41.24	199	74	3e-88
Target_name	Start	End	Length	Cov(%)
sp\|C6TH02_SOYBN	23	221	221	90.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50844.1	157	354	354	37	198	67	1e-79
Target_name	Start	End	Length	Cov(%)
AT1G26690.1	17	214	214	92.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6503	Augus-PASA	mRNA	9612	13215	.	-	.	ID=Dca50844.1;Parent=Dca50844
scaffold6503	Augus-PASA	exon	9612	9756	.	-	.	ID=Dca50844.1.exon1;Parent=Dca50844.1
scaffold6503	Augus-PASA	exon	9844	9920	.	-	.	ID=Dca50844.1.exon2;Parent=Dca50844.1
scaffold6503	Augus-PASA	exon	10954	11163	.	-	.	ID=Dca50844.1.exon3;Parent=Dca50844.1
scaffold6503	Augustus	exon	11782	11934	.	-	.	ID=Dca50844.1.exon4;Parent=Dca50844.1
scaffold6503	Augustus	exon	12736	13215	.	-	.	ID=Dca50844.1.exon5;Parent=Dca50844.1