Carnation DB

Dca50850.1

Annotation

6-exons
f-1
sp|C6TN17_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0004400;GO:0030170;GO:0000105#2F1P0C
sp|B9SB59_RICCO#Histidinol-phosphate aminotransferase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0785090#GO:0004400;GO:0080130;GO:0030170;GO:0000105#3F1P0C
Repeat List (scaffold6507)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50850.1	1	278	278	78.77	278	77	3e-121
Target_name	Start	End	Length	Cov(%)
sp\|C6TN17_SOYBN	1	286	394	72.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50850.1	48	278	278	68.34	231	83	1e-112
Target_name	Start	End	Length	Cov(%)
AT5G10330.1	49	279	417	55.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6507	Augus-PASA	mRNA	223	2796	.	-	.	ID=Dca50850.1;Parent=Dca50850
scaffold6507	Augus-PASA	exon	223	380	.	-	.	ID=Dca50850.1.exon1;Parent=Dca50850.1
scaffold6507	Augus-PASA	exon	929	1037	.	-	.	ID=Dca50850.1.exon2;Parent=Dca50850.1
scaffold6507	Augus-PASA	exon	1159	1256	.	-	.	ID=Dca50850.1.exon3;Parent=Dca50850.1
scaffold6507	Augus-PASA	exon	1380	1534	.	-	.	ID=Dca50850.1.exon4;Parent=Dca50850.1
scaffold6507	Augus-PASA	exon	1636	1719	.	-	.	ID=Dca50850.1.exon5;Parent=Dca50850.1
scaffold6507	Augustus	exon	2566	2796	.	-	.	ID=Dca50850.1.exon6;Parent=Dca50850.1