Carnation DB

Dca50875.1

Annotation

7-exons
f-1
sp|D7SHD6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g09850#unknown#0F0P0C
Repeat List (scaffold6513)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50875.1	126	247	272	18.01	122	41	1e-15
Target_name	Start	End	Length	Cov(%)
sp\|D7SHD6_VITVI	182	300	647	18.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50875.1	126	248	272	16.91	123	38	4e-13
Target_name	Start	End	Length	Cov(%)
AT3G48380.3	178	300	653	18.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6513	Augustus	mRNA	3604	11618	.	+	.	ID=Dca50875.1;Parent=Dca50875
scaffold6513	Augustus	exon	3604	3659	.	+	.	ID=Dca50875.1.exon1;Parent=Dca50875.1
scaffold6513	Augustus	exon	4321	4549	.	+	.	ID=Dca50875.1.exon2;Parent=Dca50875.1
scaffold6513	Augustus	exon	4707	4797	.	+	.	ID=Dca50875.1.exon3;Parent=Dca50875.1
scaffold6513	Augustus	exon	5224	5492	.	+	.	ID=Dca50875.1.exon4;Parent=Dca50875.1
scaffold6513	Augustus	exon	5668	5755	.	+	.	ID=Dca50875.1.exon5;Parent=Dca50875.1
scaffold6513	Augustus	exon	10438	10495	.	+	.	ID=Dca50875.1.exon6;Parent=Dca50875.1
scaffold6513	Augustus	exon	11591	11618	.	+	.	ID=Dca50875.1.exon7;Parent=Dca50875.1