Dca50920.1
Annotation
- 2-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold6528)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50920.1 |
1 |
788 |
991 |
48.53 |
788 |
60 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
105 |
884 |
1038 |
75.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50920.1 |
238 |
895 |
991 |
21.59 |
658 |
31 |
1e-92
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1043 |
1401 |
47.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6528 |
Augustus |
mRNA |
11514 |
16794 |
. |
- |
. |
ID=Dca50920.1;Parent=Dca50920 |
| scaffold6528 |
Augustus |
exon |
11514 |
11799 |
. |
- |
. |
ID=Dca50920.1.exon1;Parent=Dca50920.1 |
| scaffold6528 |
Augustus |
exon |
14105 |
16794 |
. |
- |
. |
ID=Dca50920.1.exon2;Parent=Dca50920.1 |
