Dca51093.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold6571)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51093.1 |
75 |
744 |
775 |
38.7 |
670 |
40 |
1e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
737 |
1717 |
42.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51093.1 |
512 |
606 |
775 |
4.12 |
95 |
34 |
2e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
191 |
192 |
48.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6571 |
Augustus |
mRNA |
17358 |
19947 |
. |
+ |
. |
ID=Dca51093.1;Parent=Dca51093 |
| scaffold6571 |
Augustus |
exon |
17358 |
18219 |
. |
+ |
. |
ID=Dca51093.1.exon1;Parent=Dca51093.1 |
| scaffold6571 |
Augustus |
exon |
18348 |
19626 |
. |
+ |
. |
ID=Dca51093.1.exon2;Parent=Dca51093.1 |
| scaffold6571 |
Augustus |
exon |
19761 |
19947 |
. |
+ |
. |
ID=Dca51093.1.exon3;Parent=Dca51093.1 |
