Dca51099.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold6573)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51099.1 |
29 |
767 |
791 |
45.51 |
739 |
46 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
19 |
781 |
1501 |
50.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51099.1 |
345 |
769 |
791 |
20.85 |
425 |
39 |
3e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
411 |
809 |
1539 |
25.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6573 |
Augustus |
mRNA |
9954 |
12418 |
. |
- |
. |
ID=Dca51099.1;Parent=Dca51099 |
| scaffold6573 |
Augustus |
exon |
9954 |
10508 |
. |
- |
. |
ID=Dca51099.1.exon1;Parent=Dca51099.1 |
| scaffold6573 |
Augustus |
exon |
10598 |
12418 |
. |
- |
. |
ID=Dca51099.1.exon2;Parent=Dca51099.1 |
