Dca51109.1
Annotation
- 4-exons
- f-1
- sp|D7KVT4_ARALL#EMB1473#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_477028#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- Repeat List (scaffold6577)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51109.1 |
6 |
234 |
237 |
70.46 |
229 |
72 |
2e-93
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7KVT4_ARALL |
5 |
239 |
242 |
97.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51109.1 |
22 |
234 |
237 |
66.66 |
213 |
74 |
9e-93
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G78630.1 |
24 |
238 |
241 |
89.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6577 |
Augus-PASA |
mRNA |
5126 |
8763 |
. |
- |
. |
ID=Dca51109.1;Parent=Dca51109 |
| scaffold6577 |
Augus-PASA |
exon |
5126 |
5242 |
. |
- |
. |
ID=Dca51109.1.exon1;Parent=Dca51109.1 |
| scaffold6577 |
Augus-PASA |
exon |
5583 |
5753 |
. |
- |
. |
ID=Dca51109.1.exon2;Parent=Dca51109.1 |
| scaffold6577 |
Augus-PASA |
exon |
6128 |
6313 |
. |
- |
. |
ID=Dca51109.1.exon3;Parent=Dca51109.1 |
| scaffold6577 |
Augus-PASA |
exon |
8524 |
8763 |
. |
- |
. |
ID=Dca51109.1.exon4;Parent=Dca51109.1 |
