Dca51152.1
Annotation
- 3-exons
- f-1
- sp|Q9FKA8_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold659)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51152.1 |
3 |
111 |
272 |
13.97 |
109 |
35 |
7e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FKA8_ARATH |
70 |
177 |
370 |
29.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51152.1 |
2 |
111 |
272 |
11.76 |
110 |
30 |
4e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
59 |
167 |
237 |
45.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold659 |
Augustus |
mRNA |
47874 |
49144 |
. |
- |
. |
ID=Dca51152.1;Parent=Dca51152 |
| scaffold659 |
Augustus |
exon |
47874 |
48068 |
. |
- |
. |
ID=Dca51152.1.exon1;Parent=Dca51152.1 |
| scaffold659 |
Augustus |
exon |
48368 |
48642 |
. |
- |
. |
ID=Dca51152.1.exon2;Parent=Dca51152.1 |
| scaffold659 |
Augustus |
exon |
48796 |
49144 |
. |
- |
. |
ID=Dca51152.1.exon3;Parent=Dca51152.1 |
