Dca51283.1
Annotation
- 3-exons
- f-1
- sp|O64473_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g19100#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold6618)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51283.1 |
81 |
387 |
588 |
19.89 |
307 |
30 |
4e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O64473_ARATH |
764 |
1157 |
1447 |
27.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51283.1 |
32 |
242 |
588 |
12.92 |
211 |
35 |
5e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
386 |
598 |
626 |
34.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6618 |
Augustus |
mRNA |
7199 |
9753 |
. |
- |
. |
ID=Dca51283.1;Parent=Dca51283 |
| scaffold6618 |
Augustus |
exon |
7199 |
7934 |
. |
- |
. |
ID=Dca51283.1.exon1;Parent=Dca51283.1 |
| scaffold6618 |
Augustus |
exon |
8167 |
8458 |
. |
- |
. |
ID=Dca51283.1.exon2;Parent=Dca51283.1 |
| scaffold6618 |
Augustus |
exon |
9015 |
9753 |
. |
- |
. |
ID=Dca51283.1.exon3;Parent=Dca51283.1 |
