Dca5136.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold11971)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5136.1 |
34 |
634 |
634 |
43.69 |
601 |
43 |
4e-145
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
106 |
746 |
1313 |
48.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5136.1 |
309 |
634 |
634 |
17.19 |
326 |
33 |
7e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
389 |
717 |
1428 |
23.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11971 |
Augustus |
mRNA |
1 |
2029 |
. |
- |
. |
ID=Dca5136.1;Parent=Dca5136 |
| scaffold11971 |
Augustus |
exon |
1 |
1021 |
. |
- |
. |
ID=Dca5136.1.exon1;Parent=Dca5136.1 |
| scaffold11971 |
Augustus |
exon |
1148 |
2029 |
. |
- |
. |
ID=Dca5136.1.exon2;Parent=Dca5136.1 |
