Carnation DB

Dca51368.1

Annotation

5-exons
f-1
sp|A9P853_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005524;GO:0008026;GO:0003676#3F0P0C
sp|B9SX92_RICCO#Dead box ATP-dependent RNA helicase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0859910#GO:0005524;GO:0008026;GO:0003676#3F0P0C
Repeat List (scaffold664)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51368.1	1	149	195	47.17	149	62	7e-45
Target_name	Start	End	Length	Cov(%)
sp\|A9P853_POPTR	265	413	619	24.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51368.1	1	146	195	42.05	146	56	5e-40
Target_name	Start	End	Length	Cov(%)
Os03t0728800-01	318	465	671	22.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold664	Augustus	mRNA	118926	121903	.	+	.	ID=Dca51368.1;Parent=Dca51368
scaffold664	Augustus	exon	118926	119087	.	+	.	ID=Dca51368.1.exon1;Parent=Dca51368.1
scaffold664	Augustus	exon	119364	119429	.	+	.	ID=Dca51368.1.exon2;Parent=Dca51368.1
scaffold664	Augustus	exon	119607	119786	.	+	.	ID=Dca51368.1.exon3;Parent=Dca51368.1
scaffold664	Augustus	exon	120559	120634	.	+	.	ID=Dca51368.1.exon4;Parent=Dca51368.1
scaffold664	Augustus	exon	121800	121903	.	+	.	ID=Dca51368.1.exon5;Parent=Dca51368.1