Carnation DB

Dca51396.1

Annotation

8-exons
f-1
sp|A5AL12_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g04520#GO:0005488#1F0P0C
AT3G22990.1 | Symbols: LFR | ARM repeat superfamily protein | chr3:8164015-8166145 FORWARD LENGTH=460
Repeat List (scaffold665)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51396.1	1	456	456	76.09	456	76	0
Target_name	Start	End	Length	Cov(%)
sp\|A5AL12_VITVI	1	457	457	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51396.1	1	456	456	67.98	456	68	6e-163
Target_name	Start	End	Length	Cov(%)
AT3G22990.1	1	460	460	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold665	Augustus	mRNA	5194	8514	.	-	.	ID=Dca51396.1;Parent=Dca51396
scaffold665	Augustus	exon	5194	5449	.	-	.	ID=Dca51396.1.exon1;Parent=Dca51396.1
scaffold665	Augustus	exon	5736	5863	.	-	.	ID=Dca51396.1.exon2;Parent=Dca51396.1
scaffold665	Augustus	exon	5956	6094	.	-	.	ID=Dca51396.1.exon3;Parent=Dca51396.1
scaffold665	Augustus	exon	6177	6282	.	-	.	ID=Dca51396.1.exon4;Parent=Dca51396.1
scaffold665	Augustus	exon	6654	6907	.	-	.	ID=Dca51396.1.exon5;Parent=Dca51396.1
scaffold665	Augustus	exon	7000	7139	.	-	.	ID=Dca51396.1.exon6;Parent=Dca51396.1
scaffold665	Augustus	exon	7254	7423	.	-	.	ID=Dca51396.1.exon7;Parent=Dca51396.1
scaffold665	Augustus	exon	8337	8514	.	-	.	ID=Dca51396.1.exon8;Parent=Dca51396.1