Dca51422.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2QTV1_ORYSJ#Transposable element protein, putative, Retrotrans_gag#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g18420#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold6655)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51422.1 |
42 |
425 |
479 |
37.78 |
384 |
42 |
2e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
374 |
793 |
1717 |
24.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51422.1 |
174 |
243 |
479 |
5.63 |
70 |
39 |
8e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
166 |
192 |
35.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6655 |
Augustus |
mRNA |
11656 |
13190 |
. |
+ |
. |
ID=Dca51422.1;Parent=Dca51422 |
| scaffold6655 |
Augustus |
exon |
11656 |
12394 |
. |
+ |
. |
ID=Dca51422.1.exon1;Parent=Dca51422.1 |
| scaffold6655 |
Augustus |
exon |
12490 |
13190 |
. |
+ |
. |
ID=Dca51422.1.exon2;Parent=Dca51422.1 |
