Dca51434.1
Annotation
- 4-exons
- f-1
- sp|Q9ZUF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05980#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold666)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51434.1 |
8 |
191 |
266 |
22.93 |
184 |
32 |
2e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZUF0_ARATH |
541 |
730 |
1352 |
14.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51434.1 |
100 |
190 |
266 |
12.4 |
91 |
37 |
8e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
387 |
477 |
857 |
10.61 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold666 |
Augustus |
mRNA |
63404 |
66290 |
. |
+ |
. |
ID=Dca51434.1;Parent=Dca51434 |
| scaffold666 |
Augustus |
exon |
63404 |
63698 |
. |
+ |
. |
ID=Dca51434.1.exon1;Parent=Dca51434.1 |
| scaffold666 |
Augustus |
exon |
63855 |
64137 |
. |
+ |
. |
ID=Dca51434.1.exon2;Parent=Dca51434.1 |
| scaffold666 |
Augustus |
exon |
64859 |
65012 |
. |
+ |
. |
ID=Dca51434.1.exon3;Parent=Dca51434.1 |
| scaffold666 |
Augustus |
exon |
66222 |
66290 |
. |
+ |
. |
ID=Dca51434.1.exon4;Parent=Dca51434.1 |
