Carnation DB

Dca51453.1

Annotation

20-exons
f-1
sp|G7IM77_MEDTR#Shaggy-related protein kinase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g083940#GO:0005524;GO:0004674#2F0P0C
Repeat List (scaffold6666)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51453.1	37	326	697	37.44	290	90	3e-158
Target_name	Start	End	Length	Cov(%)
sp\|G7IM77_MEDTR	43	332	423	68.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51453.1	11	326	697	38.88	316	86	6e-160
Target_name	Start	End	Length	Cov(%)
AT1G06390.1	11	317	407	75.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6666	Augus-PASA	mRNA	3457	11073	.	-	.	ID=Dca51453.1;Parent=Dca51453
scaffold6666	Augus-PASA	exon	3457	3540	.	-	.	ID=Dca51453.1.exon1;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	3655	3756	.	-	.	ID=Dca51453.1.exon2;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	3872	3955	.	-	.	ID=Dca51453.1.exon3;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	4602	4697	.	-	.	ID=Dca51453.1.exon4;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	4793	4843	.	-	.	ID=Dca51453.1.exon5;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	5003	5143	.	-	.	ID=Dca51453.1.exon6;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	5591	5647	.	-	.	ID=Dca51453.1.exon7;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	5742	5816	.	-	.	ID=Dca51453.1.exon8;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	5935	6207	.	-	.	ID=Dca51453.1.exon9;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	6300	6359	.	-	.	ID=Dca51453.1.exon10;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	6562	6654	.	-	.	ID=Dca51453.1.exon11;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	7655	7750	.	-	.	ID=Dca51453.1.exon12;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	7847	7897	.	-	.	ID=Dca51453.1.exon13;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	8057	8197	.	-	.	ID=Dca51453.1.exon14;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	8645	8701	.	-	.	ID=Dca51453.1.exon15;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	8796	8870	.	-	.	ID=Dca51453.1.exon16;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	8989	9261	.	-	.	ID=Dca51453.1.exon17;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	9354	9413	.	-	.	ID=Dca51453.1.exon18;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	9616	9708	.	-	.	ID=Dca51453.1.exon19;Parent=Dca51453.1
scaffold6666	Augus-PASA	exon	10942	11073	.	-	.	ID=Dca51453.1.exon20;Parent=Dca51453.1