Dca51484.1
Annotation
- 2-exons
- f-1
- sp|O82216_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g23880#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold6675)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51484.1 |
77 |
325 |
325 |
37.23 |
249 |
49 |
2e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O82216_ARATH |
164 |
412 |
1216 |
20.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51484.1 |
77 |
309 |
325 |
28.3 |
233 |
40 |
3e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
342 |
571 |
857 |
26.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6675 |
Augustus |
mRNA |
1258 |
2501 |
. |
- |
. |
ID=Dca51484.1;Parent=Dca51484 |
| scaffold6675 |
Augustus |
exon |
1258 |
2062 |
. |
- |
. |
ID=Dca51484.1.exon1;Parent=Dca51484.1 |
| scaffold6675 |
Augustus |
exon |
2329 |
2501 |
. |
- |
. |
ID=Dca51484.1.exon2;Parent=Dca51484.1 |
