Carnation DB

Dca51492.1

Annotation

6-exons
f-1
sp|E0CS09_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g00320#GO:0003677;GO:0046983#2F0P0C
Os03t0733400-01 Zinc finger, BED-type predicted domain containing protein.
Repeat List (scaffold6678)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51492.1	273	382	574	7.14	110	37	2e-08
Target_name	Start	End	Length	Cov(%)
sp\|E0CS09_VITVI	126	235	677	16.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51492.1	408	574	574	9.58	167	33	9e-24
Target_name	Start	End	Length	Cov(%)
Os03t0733400-01	394	560	723	23.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6678	Augustus	mRNA	3622	8832	.	+	.	ID=Dca51492.1;Parent=Dca51492
scaffold6678	Augustus	exon	3622	3718	.	+	.	ID=Dca51492.1.exon1;Parent=Dca51492.1
scaffold6678	Augustus	exon	6368	6422	.	+	.	ID=Dca51492.1.exon2;Parent=Dca51492.1
scaffold6678	Augustus	exon	6543	7093	.	+	.	ID=Dca51492.1.exon3;Parent=Dca51492.1
scaffold6678	Augustus	exon	7292	7422	.	+	.	ID=Dca51492.1.exon4;Parent=Dca51492.1
scaffold6678	Augustus	exon	7663	7995	.	+	.	ID=Dca51492.1.exon5;Parent=Dca51492.1
scaffold6678	Augustus	exon	8275	8832	.	+	.	ID=Dca51492.1.exon6;Parent=Dca51492.1