Carnation DB

Dca51571.1

Annotation

9-exons
f-1
sp|D7SJM8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g07670#unknown#0F0P0C
AT2G30280.1 | Symbols: RDM4, DMS4 | RNA-directed DNA methylation 4 | chr2:12909804-12911860 REVERSE LENGTH=346
Repeat List (scaffold6699)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51571.1	24	381	381	46.98	358	48	1e-76
Target_name	Start	End	Length	Cov(%)
sp\|D7SJM8_VITVI	10	355	355	97.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51571.1	11	294	381	36.48	284	48	1e-59
Target_name	Start	End	Length	Cov(%)
AT2G30280.1	3	278	346	79.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6699	Augus-PASA	mRNA	10338	13080	.	-	.	ID=Dca51571.1;Parent=Dca51571
scaffold6699	Augus-PASA	exon	10338	10630	.	-	.	ID=Dca51571.1.exon1;Parent=Dca51571.1
scaffold6699	Augus-PASA	exon	10746	10819	.	-	.	ID=Dca51571.1.exon2;Parent=Dca51571.1
scaffold6699	Augustus	exon	10925	11006	.	-	.	ID=Dca51571.1.exon3;Parent=Dca51571.1
scaffold6699	Augustus	exon	11238	11347	.	-	.	ID=Dca51571.1.exon4;Parent=Dca51571.1
scaffold6699	Augustus	exon	11680	11834	.	-	.	ID=Dca51571.1.exon5;Parent=Dca51571.1
scaffold6699	Augustus	exon	12202	12243	.	-	.	ID=Dca51571.1.exon6;Parent=Dca51571.1
scaffold6699	Augustus	exon	12341	12421	.	-	.	ID=Dca51571.1.exon7;Parent=Dca51571.1
scaffold6699	Augustus	exon	12528	12616	.	-	.	ID=Dca51571.1.exon8;Parent=Dca51571.1
scaffold6699	Augustus	exon	12861	13080	.	-	.	ID=Dca51571.1.exon9;Parent=Dca51571.1