Dca51584.1
Annotation
- 3-exons
- f-1
- sp|Q5MG99_IPOBA#Hypothetical retrotransposon#Ipomoea batatas (Sweet potato) (Convolvulus batatas)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold67)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51584.1 |
1 |
89 |
148 |
42.56 |
89 |
48 |
1e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5MG99_IPOBA |
1162 |
1293 |
1415 |
9.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51584.1 |
45 |
88 |
148 |
14.18 |
44 |
48 |
2e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1367 |
1410 |
1428 |
3.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold67 |
Augustus |
mRNA |
167444 |
169378 |
. |
- |
. |
ID=Dca51584.1;Parent=Dca51584 |
| scaffold67 |
Augustus |
exon |
167444 |
167596 |
. |
- |
. |
ID=Dca51584.1.exon1;Parent=Dca51584.1 |
| scaffold67 |
Augustus |
exon |
168890 |
169052 |
. |
- |
. |
ID=Dca51584.1.exon2;Parent=Dca51584.1 |
| scaffold67 |
Augustus |
exon |
169248 |
169378 |
. |
- |
. |
ID=Dca51584.1.exon3;Parent=Dca51584.1 |
