Dca5165.1
Annotation
- 3-exons
- f-1
- sp|B9HCL8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_762490#GO:0016021;GO:0005524;GO:0004674#2F0P1C
- AT5G20480.1 | Symbols: EFR | EF-TU receptor | chr5:6922497-6925679 FORWARD LENGTH=1031
- Repeat List (scaffold11989)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5165.1 |
1 |
94 |
100 |
42 |
94 |
45 |
7e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9SZK5_RICCO |
924 |
1014 |
1015 |
8.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5165.1 |
1 |
88 |
100 |
36 |
88 |
41 |
3e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0152000-01 |
958 |
1038 |
1066 |
7.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11989 |
Augustus |
mRNA |
1672 |
5252 |
. |
+ |
. |
ID=Dca5165.1;Parent=Dca5165 |
| scaffold11989 |
Augustus |
exon |
1672 |
3369 |
. |
+ |
. |
ID=Dca5165.1.exon1;Parent=Dca5165.1 |
| scaffold11989 |
Augustus |
exon |
3685 |
4480 |
. |
+ |
. |
ID=Dca5165.1.exon2;Parent=Dca5165.1 |
| scaffold11989 |
Augustus |
exon |
4930 |
5252 |
. |
+ |
. |
ID=Dca5165.1.exon3;Parent=Dca5165.1 |
