Carnation DB

Dca51726.1

Annotation

10-exons
f-1
sp|A5BJS1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_009443#GO:0005634#0F0P1C
AT4G20325.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:10980124-10982426 FORWARD LENGTH=277
Repeat List (scaffold673)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51726.1	1	277	283	63.25	277	65	3e-100
Target_name	Start	End	Length	Cov(%)
sp\|A5BJS1_VITVI	1	276	277	99.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51726.1	3	279	283	58.65	277	60	3e-94
Target_name	Start	End	Length	Cov(%)
AT4G20325.1	6	276	277	97.83

seqname	source	feature	start	end	score	strand	frame	group
scaffold673	Augus-PASA	mRNA	71252	75771	.	+	.	ID=Dca51726.1;Parent=Dca51726
scaffold673	Augus-PASA	exon	71252	71303	.	+	.	ID=Dca51726.1.exon1;Parent=Dca51726.1
scaffold673	Augus-PASA	exon	71578	71637	.	+	.	ID=Dca51726.1.exon2;Parent=Dca51726.1
scaffold673	Augus-PASA	exon	71770	71871	.	+	.	ID=Dca51726.1.exon3;Parent=Dca51726.1
scaffold673	Augus-PASA	exon	72295	72371	.	+	.	ID=Dca51726.1.exon4;Parent=Dca51726.1
scaffold673	Augus-PASA	exon	73325	73448	.	+	.	ID=Dca51726.1.exon5;Parent=Dca51726.1
scaffold673	Augus-PASA	exon	74331	74395	.	+	.	ID=Dca51726.1.exon6;Parent=Dca51726.1
scaffold673	Augus-PASA	exon	74537	74606	.	+	.	ID=Dca51726.1.exon7;Parent=Dca51726.1
scaffold673	Augus-PASA	exon	74849	74924	.	+	.	ID=Dca51726.1.exon8;Parent=Dca51726.1
scaffold673	Augus-PASA	exon	75149	75230	.	+	.	ID=Dca51726.1.exon9;Parent=Dca51726.1
scaffold673	Augus-PASA	exon	75628	75771	.	+	.	ID=Dca51726.1.exon10;Parent=Dca51726.1