Carnation DB

Dca51731.1

Annotation

6-exons
f-1
sp|A5BDE5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_023316#GO:0003950#1F0P0C
AT1G32230.1 | Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE protein-protein interaction domain protein family | chr1:11613427-11615894 FORWARD LENGTH=589
Repeat List (scaffold673)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51731.1	1	574	592	45.77	574	43	6e-131
Target_name	Start	End	Length	Cov(%)
sp\|A5BDE5_VITVI	1	618	857	72.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51731.1	1	571	592	38.34	571	39	1e-101
Target_name	Start	End	Length	Cov(%)
AT1G32230.1	1	566	589	96.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold673	Augustus	mRNA	110709	116331	.	+	.	ID=Dca51731.1;Parent=Dca51731
scaffold673	Augustus	exon	110709	111826	.	+	.	ID=Dca51731.1.exon1;Parent=Dca51731.1
scaffold673	Augus-PASA	exon	113827	114068	.	+	.	ID=Dca51731.1.exon2;Parent=Dca51731.1
scaffold673	Augus-PASA	exon	114388	114464	.	+	.	ID=Dca51731.1.exon3;Parent=Dca51731.1
scaffold673	Augus-PASA	exon	115379	115567	.	+	.	ID=Dca51731.1.exon4;Parent=Dca51731.1
scaffold673	Augus-PASA	exon	115664	115759	.	+	.	ID=Dca51731.1.exon5;Parent=Dca51731.1
scaffold673	Augus-PASA	exon	116275	116331	.	+	.	ID=Dca51731.1.exon6;Parent=Dca51731.1