Dca51780.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold6745)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51780.1 |
481 |
562 |
562 |
6.76 |
82 |
47 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
23 |
104 |
1501 |
5.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51780.1 |
62 |
232 |
562 |
9.25 |
171 |
31 |
8e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
250 |
296 |
57.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6745 |
Augustus |
mRNA |
5774 |
10289 |
. |
- |
. |
ID=Dca51780.1;Parent=Dca51780 |
| scaffold6745 |
Augustus |
exon |
5774 |
6129 |
. |
- |
. |
ID=Dca51780.1.exon1;Parent=Dca51780.1 |
| scaffold6745 |
Augustus |
exon |
6851 |
6947 |
. |
- |
. |
ID=Dca51780.1.exon2;Parent=Dca51780.1 |
| scaffold6745 |
Augustus |
exon |
7033 |
7170 |
. |
- |
. |
ID=Dca51780.1.exon3;Parent=Dca51780.1 |
| scaffold6745 |
Augustus |
exon |
9192 |
10289 |
. |
- |
. |
ID=Dca51780.1.exon4;Parent=Dca51780.1 |
