Dca5179.1
Annotation
- 2-exons
- f-1
- sp|B9H9W7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_813903#unknown#0F0P0C
- Os12t0129000-01 Uncharacterised protein family UPF0414 domain containing protein.
- Repeat List (scaffold12)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5179.1 |
1 |
124 |
124 |
70.96 |
124 |
71 |
2e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H9W7_POPTR |
1 |
115 |
115 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5179.1 |
1 |
124 |
124 |
66.93 |
124 |
67 |
3e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G29170.1 |
1 |
121 |
121 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12 |
Augustus |
mRNA |
40269 |
41156 |
. |
- |
. |
ID=Dca5179.1;Parent=Dca5179 |
| scaffold12 |
Augustus |
exon |
40269 |
40348 |
. |
- |
. |
ID=Dca5179.1.exon1;Parent=Dca5179.1 |
| scaffold12 |
Augustus |
exon |
40862 |
41156 |
. |
- |
. |
ID=Dca5179.1.exon2;Parent=Dca5179.1 |
