Carnation DB

Dca51797.1

Annotation

13-exons
f-1
sp|D7M460_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_912026#unknown#0F0P0C
AT4G02030.2 | Symbols: | Vps51/Vps67 family (components of vesicular transport) protein | chr4:892262-897175 FORWARD LENGTH=805
Repeat List (scaffold675)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51797.1	5	477	478	51.25	473	44	8e-113
Target_name	Start	End	Length	Cov(%)
sp\|D7M460_ARALL	4	521	780	66.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51797.1	5	477	478	50.83	473	42	7e-109
Target_name	Start	End	Length	Cov(%)
AT4G02030.2	4	546	805	67.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold675	Augustus	mRNA	24886	32594	.	-	.	ID=Dca51797.1;Parent=Dca51797
scaffold675	Augustus	exon	24886	25158	.	-	.	ID=Dca51797.1.exon1;Parent=Dca51797.1
scaffold675	Augustus	exon	25505	25623	.	-	.	ID=Dca51797.1.exon2;Parent=Dca51797.1
scaffold675	Augustus	exon	26184	26250	.	-	.	ID=Dca51797.1.exon3;Parent=Dca51797.1
scaffold675	Augustus	exon	26343	26416	.	-	.	ID=Dca51797.1.exon4;Parent=Dca51797.1
scaffold675	Augustus	exon	26628	26747	.	-	.	ID=Dca51797.1.exon5;Parent=Dca51797.1
scaffold675	Augustus	exon	27032	27099	.	-	.	ID=Dca51797.1.exon6;Parent=Dca51797.1
scaffold675	Augustus	exon	27214	27314	.	-	.	ID=Dca51797.1.exon7;Parent=Dca51797.1
scaffold675	Augustus	exon	28247	28396	.	-	.	ID=Dca51797.1.exon8;Parent=Dca51797.1
scaffold675	Augustus	exon	28498	28575	.	-	.	ID=Dca51797.1.exon9;Parent=Dca51797.1
scaffold675	Augustus	exon	29174	29251	.	-	.	ID=Dca51797.1.exon10;Parent=Dca51797.1
scaffold675	Augustus	exon	30092	30146	.	-	.	ID=Dca51797.1.exon11;Parent=Dca51797.1
scaffold675	Augustus	exon	30488	30573	.	-	.	ID=Dca51797.1.exon12;Parent=Dca51797.1
scaffold675	Augustus	exon	32427	32594	.	-	.	ID=Dca51797.1.exon13;Parent=Dca51797.1