Dca51860.1
Annotation
- 3-exons
- f-1
- sp|Q8LMV8_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0040E17.21#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold6769)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51860.1 |
78 |
623 |
623 |
47.67 |
546 |
53 |
5e-174
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8LMV8_ORYSJ |
251 |
798 |
1406 |
38.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51860.1 |
132 |
617 |
623 |
32.58 |
486 |
40 |
3e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
411 |
908 |
1539 |
32.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6769 |
Augustus |
mRNA |
4389 |
6865 |
. |
+ |
. |
ID=Dca51860.1;Parent=Dca51860 |
| scaffold6769 |
Augustus |
exon |
4389 |
4618 |
. |
+ |
. |
ID=Dca51860.1.exon1;Parent=Dca51860.1 |
| scaffold6769 |
Augustus |
exon |
5102 |
5622 |
. |
+ |
. |
ID=Dca51860.1.exon2;Parent=Dca51860.1 |
| scaffold6769 |
Augustus |
exon |
5745 |
6865 |
. |
+ |
. |
ID=Dca51860.1.exon3;Parent=Dca51860.1 |
