Carnation DB

Dca51888.1

Annotation

6-exons
f-1
sp|B9GVG5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_711668#unknown#0F0P0C
sp|B9SIT8_RICCO#Gaba(A) receptor-associated protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0541040#GO:0004872#1F0P0C
Repeat List (scaffold6777)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51888.1	20	138	141	80.14	119	95	8e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9GVG5_POPTR	1	119	122	97.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51888.1	20	136	141	75.88	117	92	3e-59
Target_name	Start	End	Length	Cov(%)
AT4G16520.1	1	117	121	96.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6777	Augustus	mRNA	5505	8815	.	+	.	ID=Dca51888.1;Parent=Dca51888
scaffold6777	Augustus	exon	5505	5556	.	+	.	ID=Dca51888.1.exon1;Parent=Dca51888.1
scaffold6777	Augus-PASA	exon	6693	6734	.	+	.	ID=Dca51888.1.exon2;Parent=Dca51888.1
scaffold6777	Augus-PASA	exon	6816	6871	.	+	.	ID=Dca51888.1.exon3;Parent=Dca51888.1
scaffold6777	Augus-PASA	exon	7607	7659	.	+	.	ID=Dca51888.1.exon4;Parent=Dca51888.1
scaffold6777	Augus-PASA	exon	8396	8514	.	+	.	ID=Dca51888.1.exon5;Parent=Dca51888.1
scaffold6777	Augus-PASA	exon	8712	8815	.	+	.	ID=Dca51888.1.exon6;Parent=Dca51888.1