Dca51940.1
Annotation
- 4-exons
- f-1
- sp|D7L721_ARALL#Exopolygalacturonase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478122#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- Repeat List (scaffold679)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51940.1 |
26 |
392 |
397 |
52.39 |
367 |
57 |
4e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L721_ARALL |
75 |
441 |
449 |
81.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51940.1 |
26 |
392 |
397 |
51.13 |
367 |
56 |
2e-115
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G14040.1 |
71 |
437 |
445 |
82.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold679 |
Augustus |
mRNA |
114065 |
115831 |
. |
+ |
. |
ID=Dca51940.1;Parent=Dca51940 |
| scaffold679 |
Augustus |
exon |
114065 |
114187 |
. |
+ |
. |
ID=Dca51940.1.exon1;Parent=Dca51940.1 |
| scaffold679 |
Augustus |
exon |
114464 |
114784 |
. |
+ |
. |
ID=Dca51940.1.exon2;Parent=Dca51940.1 |
| scaffold679 |
Augustus |
exon |
114867 |
115382 |
. |
+ |
. |
ID=Dca51940.1.exon3;Parent=Dca51940.1 |
| scaffold679 |
Augustus |
exon |
115598 |
115831 |
. |
+ |
. |
ID=Dca51940.1.exon4;Parent=Dca51940.1 |
