Carnation DB

Dca51992.1

Annotation

5-exons
f-1
sp|A9NNA8_PICSI#Putative uncharacterized protein#Picea sitchensis (Sitka spruce) (Pinus sitchensis)#unknown#GO:0016021;GO:0016192#0F1P1C
AT2G32670.1 | Symbols: ATVAMP725, VAMP725 | vesicle-associated membrane protein 725 | chr2:13857941-13859346 FORWARD LENGTH=285
Repeat List (scaffold68)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51992.1	1	221	221	80.09	221	81	5e-107
Target_name	Start	End	Length	Cov(%)
sp\|A9NNA8_PICSI	1	221	222	99.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51992.1	1	219	221	85.06	219	86	7e-104
Target_name	Start	End	Length	Cov(%)
AT2G32670.1	66	284	285	76.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold68	Augus-PASA	mRNA	248969	251212	.	-	.	ID=Dca51992.1;Parent=Dca51992
scaffold68	Augus-PASA	exon	248969	249118	.	-	.	ID=Dca51992.1.exon1;Parent=Dca51992.1
scaffold68	Augus-PASA	exon	249385	249447	.	-	.	ID=Dca51992.1.exon2;Parent=Dca51992.1
scaffold68	Augustus	exon	249537	249657	.	-	.	ID=Dca51992.1.exon3;Parent=Dca51992.1
scaffold68	Augustus	exon	249745	249886	.	-	.	ID=Dca51992.1.exon4;Parent=Dca51992.1
scaffold68	Augustus	exon	251023	251212	.	-	.	ID=Dca51992.1.exon5;Parent=Dca51992.1