Dca52023.1
Annotation
- 4-exons
- f-1
- sp|Q0WMG9_ARATH#Putative uncharacterized protein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q9LVQ1_ARATH#Non-LTR retroelement reverse transcriptase-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold680)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52023.1 |
1 |
292 |
591 |
19.12 |
292 |
38 |
7e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q0WMG9_ARATH |
139 |
431 |
1072 |
27.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52023.1 |
1 |
257 |
591 |
15.05 |
257 |
34 |
1e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
362 |
620 |
626 |
41.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold680 |
Augustus |
mRNA |
76029 |
78485 |
. |
- |
. |
ID=Dca52023.1;Parent=Dca52023 |
| scaffold680 |
Augustus |
exon |
76029 |
76540 |
. |
- |
. |
ID=Dca52023.1.exon1;Parent=Dca52023.1 |
| scaffold680 |
Augustus |
exon |
76682 |
76840 |
. |
- |
. |
ID=Dca52023.1.exon2;Parent=Dca52023.1 |
| scaffold680 |
Augustus |
exon |
76988 |
77230 |
. |
- |
. |
ID=Dca52023.1.exon3;Parent=Dca52023.1 |
| scaffold680 |
Augustus |
exon |
77624 |
78485 |
. |
- |
. |
ID=Dca52023.1.exon4;Parent=Dca52023.1 |
