Dca52044.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold6805)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52044.1 |
74 |
308 |
308 |
55.51 |
235 |
73 |
1e-101
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
501 |
737 |
1501 |
15.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52044.1 |
74 |
308 |
308 |
35.38 |
235 |
46 |
8e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
189 |
426 |
707 |
33.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6805 |
Augustus |
mRNA |
6758 |
8787 |
. |
+ |
. |
ID=Dca52044.1;Parent=Dca52044 |
| scaffold6805 |
Augustus |
exon |
6758 |
6974 |
. |
+ |
. |
ID=Dca52044.1.exon1;Parent=Dca52044.1 |
| scaffold6805 |
Augustus |
exon |
8078 |
8787 |
. |
+ |
. |
ID=Dca52044.1.exon2;Parent=Dca52044.1 |
