Carnation DB

Dca52069.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold681)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52069.1	1	72	630	9.04	72	80	1e-25
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	630	701	1717	4.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52069.1	129	627	630	27.77	499	32	5e-54
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	689	1242	1539	35.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold681	Augustus	mRNA	40226	46035	.	-	.	ID=Dca52069.1;Parent=Dca52069
scaffold681	Augustus	exon	40226	40693	.	-	.	ID=Dca52069.1.exon1;Parent=Dca52069.1
scaffold681	Augustus	exon	40823	41212	.	-	.	ID=Dca52069.1.exon2;Parent=Dca52069.1
scaffold681	Augustus	exon	41320	42011	.	-	.	ID=Dca52069.1.exon3;Parent=Dca52069.1
scaffold681	Augustus	exon	45552	45677	.	-	.	ID=Dca52069.1.exon4;Parent=Dca52069.1
scaffold681	Augustus	exon	45819	46035	.	-	.	ID=Dca52069.1.exon5;Parent=Dca52069.1