Carnation DB

Dca5207.1

Annotation

5-exons
f-1
sp|D7SIA6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g06290#GO:0016788;GO:0006629#1F1P0C
sp|B9RLX9_RICCO#Zinc finger protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1471860#GO:0016788;GO:0006629#1F1P0C
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5207.1	5	375	378	71.69	371	73	5e-159
Target_name	Start	End	Length	Cov(%)
sp\|D7SIA6_VITVI	1	366	385	95.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5207.1	8	367	378	67.46	360	71	1e-154
Target_name	Start	End	Length	Cov(%)
AT1G74460.1	3	361	366	98.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	239062	240861	.	+	.	ID=Dca5207.1;Parent=Dca5207
scaffold12	Augustus	exon	239062	239308	.	+	.	ID=Dca5207.1.exon1;Parent=Dca5207.1
scaffold12	Augustus	exon	239423	239553	.	+	.	ID=Dca5207.1.exon2;Parent=Dca5207.1
scaffold12	Augustus	exon	239717	239956	.	+	.	ID=Dca5207.1.exon3;Parent=Dca5207.1
scaffold12	Augustus	exon	240093	240342	.	+	.	ID=Dca5207.1.exon4;Parent=Dca5207.1
scaffold12	Augustus	exon	240593	240861	.	+	.	ID=Dca5207.1.exon5;Parent=Dca5207.1