Dca52079.1
Annotation
- 3-exons
- f-1
- sp|Q9LMV1_ARATH#F5M15.26#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold681)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52079.1 |
1 |
47 |
68 |
41.17 |
47 |
60 |
3e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q688P9_ORYSJ |
1322 |
1368 |
1970 |
2.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52079.1 |
199 |
315 |
315 |
13.65 |
117 |
37 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0177800-00 |
201 |
319 |
352 |
33.8 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold681 |
Augustus |
mRNA |
77680 |
79898 |
. |
+ |
. |
ID=Dca52079.1;Parent=Dca52079 |
| scaffold681 |
Augustus |
exon |
77680 |
77819 |
. |
+ |
. |
ID=Dca52079.1.exon1;Parent=Dca52079.1 |
| scaffold681 |
Augustus |
exon |
78967 |
79245 |
. |
+ |
. |
ID=Dca52079.1.exon2;Parent=Dca52079.1 |
| scaffold681 |
Augustus |
exon |
79370 |
79898 |
. |
+ |
. |
ID=Dca52079.1.exon3;Parent=Dca52079.1 |
