Carnation DB

Dca5210.1

Annotation

5-exons
f-1
sp|A8E124_SPIOL#NEP1-interacting protein#Spinacia oleracea (Spinach)#Name=nip#GO:0008270#1F0P0C
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5210.1	3	225	225	86.66	223	88	3e-109
Target_name	Start	End	Length	Cov(%)
sp\|A8E124_SPIOL	12	235	235	95.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5210.1	3	225	225	77.33	223	78	8e-99
Target_name	Start	End	Length	Cov(%)
AT4G35840.1	14	236	236	94.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	257505	258933	.	+	.	ID=Dca5210.1;Parent=Dca5210
scaffold12	Augustus	exon	257505	257631	.	+	.	ID=Dca5210.1.exon1;Parent=Dca5210.1
scaffold12	Augustus	exon	258111	258289	.	+	.	ID=Dca5210.1.exon2;Parent=Dca5210.1
scaffold12	Augustus	exon	258379	258462	.	+	.	ID=Dca5210.1.exon3;Parent=Dca5210.1
scaffold12	Augustus	exon	258552	258716	.	+	.	ID=Dca5210.1.exon4;Parent=Dca5210.1
scaffold12	Augustus	exon	258811	258933	.	+	.	ID=Dca5210.1.exon5;Parent=Dca5210.1