Dca52176.1
Annotation
- 3-exons
- f-1
- sp|A5BA39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041694#GO:0003676;GO:0015074#1F1P0C
- sp|Q9SLF0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g16670#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold684)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52176.1 |
1 |
206 |
365 |
26.57 |
206 |
40 |
3e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BA39_VITVI |
368 |
605 |
1099 |
21.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52176.1 |
191 |
365 |
365 |
20.27 |
175 |
43 |
1e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
247 |
421 |
1262 |
13.86 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold684 |
Augustus |
mRNA |
78661 |
84679 |
. |
+ |
. |
ID=Dca52176.1;Parent=Dca52176 |
| scaffold684 |
Augustus |
exon |
78661 |
78924 |
. |
+ |
. |
ID=Dca52176.1.exon1;Parent=Dca52176.1 |
| scaffold684 |
Augustus |
exon |
79158 |
79472 |
. |
+ |
. |
ID=Dca52176.1.exon2;Parent=Dca52176.1 |
| scaffold684 |
Augustus |
exon |
84161 |
84679 |
. |
+ |
. |
ID=Dca52176.1.exon3;Parent=Dca52176.1 |
