Dca5218.1
Annotation
- 4-exons
- f-1
- sp|B9H4R1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558500#unknown#0F0P0C
- AT5G65280.1 | Symbols: GCL1 | GCR2-like 1 | chr5:26086129-26088069 REVERSE LENGTH=433
- Repeat List (scaffold12)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5218.1 |
26 |
388 |
388 |
63.91 |
363 |
67 |
4e-146
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H4R1_POPTR |
52 |
423 |
423 |
87.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5218.1 |
26 |
388 |
388 |
60.82 |
363 |
63 |
2e-137
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G65280.1 |
58 |
433 |
433 |
86.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12 |
Augustus |
mRNA |
308419 |
310004 |
. |
- |
. |
ID=Dca5218.1;Parent=Dca5218 |
| scaffold12 |
Augustus |
exon |
308419 |
309213 |
. |
- |
. |
ID=Dca5218.1.exon1;Parent=Dca5218.1 |
| scaffold12 |
Augustus |
exon |
309294 |
309405 |
. |
- |
. |
ID=Dca5218.1.exon2;Parent=Dca5218.1 |
| scaffold12 |
Augustus |
exon |
309615 |
309793 |
. |
- |
. |
ID=Dca5218.1.exon3;Parent=Dca5218.1 |
| scaffold12 |
Augustus |
exon |
309924 |
310004 |
. |
- |
. |
ID=Dca5218.1.exon4;Parent=Dca5218.1 |
