Carnation DB

Dca52188.1

Annotation

5-exons
f-1
sp|B9SIT6_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0540820#unknown#0F0P0C
AT4G16510.1 | Symbols: | YbaK/aminoacyl-tRNA synthetase-associated domain | chr4:9302816-9304869 FORWARD LENGTH=232
Repeat List (scaffold6843)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52188.1	3	230	232	68.53	228	70	2e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9SIT6_RICCO	4	231	233	97.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52188.1	6	230	232	63.36	225	66	3e-81
Target_name	Start	End	Length	Cov(%)
AT4G16510.1	13	232	232	94.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6843	Augustus	mRNA	10364	14154	.	-	.	ID=Dca52188.1;Parent=Dca52188
scaffold6843	Augustus	exon	10364	10507	.	-	.	ID=Dca52188.1.exon1;Parent=Dca52188.1
scaffold6843	Augustus	exon	11582	11670	.	-	.	ID=Dca52188.1.exon2;Parent=Dca52188.1
scaffold6843	Augustus	exon	12518	12602	.	-	.	ID=Dca52188.1.exon3;Parent=Dca52188.1
scaffold6843	Augustus	exon	12687	12764	.	-	.	ID=Dca52188.1.exon4;Parent=Dca52188.1
scaffold6843	Augustus	exon	13852	14154	.	-	.	ID=Dca52188.1.exon5;Parent=Dca52188.1