Dca52234.1
Annotation
- 4-exons
- f-1
- sp|F6H350_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g06860#GO:0008234;GO:0004221;GO:0008270;GO:0006511#3F1P0C
- AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | chr5:3410638-3412559 FORWARD LENGTH=557
- Repeat List (scaffold686)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52234.1 |
7 |
473 |
474 |
63.92 |
467 |
65 |
1e-173
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H350_VITVI |
94 |
553 |
553 |
83.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52234.1 |
10 |
472 |
474 |
55.06 |
463 |
56 |
1e-135
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G10790.1 |
97 |
557 |
557 |
82.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold686 |
Augustus |
mRNA |
36255 |
40538 |
. |
- |
. |
ID=Dca52234.1;Parent=Dca52234 |
| scaffold686 |
Augustus |
exon |
36255 |
37042 |
. |
- |
. |
ID=Dca52234.1.exon1;Parent=Dca52234.1 |
| scaffold686 |
Augustus |
exon |
37297 |
37415 |
. |
- |
. |
ID=Dca52234.1.exon2;Parent=Dca52234.1 |
| scaffold686 |
Augustus |
exon |
38231 |
38713 |
. |
- |
. |
ID=Dca52234.1.exon3;Parent=Dca52234.1 |
| scaffold686 |
Augustus |
exon |
40504 |
40538 |
. |
- |
. |
ID=Dca52234.1.exon4;Parent=Dca52234.1 |
