Dca5225.1
Annotation
- 2-exons
- f-1
- sp|B9I7Y7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_240834#GO:0008270#1F0P0C
- AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:7949581-7950726 FORWARD LENGTH=381
- Repeat List (scaffold12)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5225.1 |
8 |
209 |
249 |
40.96 |
202 |
34 |
3e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I7Y7_POPTR |
1 |
300 |
337 |
89.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5225.1 |
17 |
192 |
249 |
29.71 |
176 |
39 |
3e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G22500.1 |
20 |
202 |
381 |
48.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12 |
Augustus |
mRNA |
359638 |
360470 |
. |
+ |
. |
ID=Dca5225.1;Parent=Dca5225 |
| scaffold12 |
Augustus |
exon |
359638 |
360197 |
. |
+ |
. |
ID=Dca5225.1.exon1;Parent=Dca5225.1 |
| scaffold12 |
Augustus |
exon |
360281 |
360470 |
. |
+ |
. |
ID=Dca5225.1.exon2;Parent=Dca5225.1 |
