Carnation DB

Dca52279.1

Annotation

15-exons
f-1618
sp|B9HFA9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1083676#GO:0050660;GO:0008762#2F0P0C
AT4G36400.1 | Symbols: | FAD-linked oxidases family protein | chr4:17197265-17200472 FORWARD LENGTH=559
Repeat List (scaffold6871)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52279.1	1	446	446	30.26	446	30	4e-41
Target_name	Start	End	Length	Cov(%)
sp\|F4NCI4_BETVU	931	1366	1369	31.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52279.1	1	434	435	77.47	434	78	0
Target_name	Start	End	Length	Cov(%)
AT4G36400.1	127	559	559	77.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6871	Augustus	mRNA	14785	26223	.	+	.	ID=Dca52279.1;Parent=Dca52279
scaffold6871	Augustus	exon	14785	16123	.	+	.	ID=Dca52279.1.exon1;Parent=Dca52279.1
scaffold6871	Augustus	exon	19400	19734	.	+	.	ID=Dca52279.1.exon2;Parent=Dca52279.1
scaffold6871	Augustus	exon	19874	19975	.	+	.	ID=Dca52279.1.exon3;Parent=Dca52279.1
scaffold6871	Augustus	exon	20449	20496	.	+	.	ID=Dca52279.1.exon4;Parent=Dca52279.1
scaffold6871	Augus-PASA	exon	21453	21523	.	+	.	ID=Dca52279.1.exon5;Parent=Dca52279.1
scaffold6871	Augus-PASA	exon	22138	22256	.	+	.	ID=Dca52279.1.exon6;Parent=Dca52279.1
scaffold6871	Augustus	exon	22816	22911	.	+	.	ID=Dca52279.1.exon7;Parent=Dca52279.1
scaffold6871	Augus-PASA	exon	23012	23121	.	+	.	ID=Dca52279.1.exon8;Parent=Dca52279.1
scaffold6871	Augus-PASA	exon	23393	23473	.	+	.	ID=Dca52279.1.exon9;Parent=Dca52279.1
scaffold6871	Augus-PASA	exon	23788	23888	.	+	.	ID=Dca52279.1.exon10;Parent=Dca52279.1
scaffold6871	Augus-PASA	exon	24284	24392	.	+	.	ID=Dca52279.1.exon11;Parent=Dca52279.1
scaffold6871	Augustus	exon	24942	25047	.	+	.	ID=Dca52279.1.exon12;Parent=Dca52279.1
scaffold6871	Augustus	exon	25305	25390	.	+	.	ID=Dca52279.1.exon13;Parent=Dca52279.1
scaffold6871	Augustus	exon	25471	25596	.	+	.	ID=Dca52279.1.exon14;Parent=Dca52279.1
scaffold6871	Augustus	exon	26128	26223	.	+	.	ID=Dca52279.1.exon15;Parent=Dca52279.1