Carnation DB

Dca5229.1

Annotation

6-exons
f-1
sp|C6TGW6_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#unknown#0F0P0C
AT4G38090.1 | Symbols: | Ribosomal protein S5 domain 2-like superfamily protein | chr4:17883757-17884702 REVERSE LENGTH=234
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5229.1	2	208	209	77.03	207	78	6e-95
Target_name	Start	End	Length	Cov(%)
sp\|C6TGW6_SOYBN	29	235	236	87.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5229.1	6	208	209	74.16	203	76	1e-86
Target_name	Start	End	Length	Cov(%)
AT4G38090.1	30	233	234	87.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	391024	392623	.	+	.	ID=Dca5229.1;Parent=Dca5229
scaffold12	Augustus	exon	391024	391176	.	+	.	ID=Dca5229.1.exon1;Parent=Dca5229.1
scaffold12	Augustus	exon	391426	391467	.	+	.	ID=Dca5229.1.exon2;Parent=Dca5229.1
scaffold12	Augustus	exon	391730	391845	.	+	.	ID=Dca5229.1.exon3;Parent=Dca5229.1
scaffold12	Augustus	exon	391933	392038	.	+	.	ID=Dca5229.1.exon4;Parent=Dca5229.1
scaffold12	Augustus	exon	392220	392273	.	+	.	ID=Dca5229.1.exon5;Parent=Dca5229.1
scaffold12	Augustus	exon	392465	392623	.	+	.	ID=Dca5229.1.exon6;Parent=Dca5229.1