Carnation DB

Dca52327.1

Annotation

5-exons
f-1
sp|B9N2T6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_924797#unknown#0F0P0C
Repeat List (scaffold689)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52327.1	35	392	392	45.91	358	50	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9N2T6_POPTR	11	365	365	97.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52327.1	56	350	392	35.45	295	46	7e-70
Target_name	Start	End	Length	Cov(%)
AT1G32730.1	19	317	327	91.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold689	Augustus	mRNA	1089	4550	.	-	.	ID=Dca52327.1;Parent=Dca52327
scaffold689	Augustus	exon	1089	1778	.	-	.	ID=Dca52327.1.exon1;Parent=Dca52327.1
scaffold689	Augustus	exon	1876	1978	.	-	.	ID=Dca52327.1.exon2;Parent=Dca52327.1
scaffold689	Augustus	exon	2240	2330	.	-	.	ID=Dca52327.1.exon3;Parent=Dca52327.1
scaffold689	Augustus	exon	2959	3020	.	-	.	ID=Dca52327.1.exon4;Parent=Dca52327.1
scaffold689	Augustus	exon	4318	4550	.	-	.	ID=Dca52327.1.exon5;Parent=Dca52327.1