Carnation DB

Dca5234.1

Annotation

8-exons
f-1
sp|B9GN42_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_850277#GO:0016020#0F0P1C
AT5G10490.1 | Symbols: MSL2 | MSCS-like 2 | chr5:3300376-3304005 REVERSE LENGTH=673
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5234.1	1	470	470	60.85	470	54	1e-144
Target_name	Start	End	Length	Cov(%)
sp\|B9GN42_POPTR	109	624	628	82.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5234.1	1	470	470	58.08	470	52	1e-128
Target_name	Start	End	Length	Cov(%)
AT5G10490.1	155	661	673	75.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	442829	445957	.	-	.	ID=Dca5234.1;Parent=Dca5234
scaffold12	Augustus	exon	442829	443575	.	-	.	ID=Dca5234.1.exon1;Parent=Dca5234.1
scaffold12	Augustus	exon	443882	443938	.	-	.	ID=Dca5234.1.exon2;Parent=Dca5234.1
scaffold12	Augustus	exon	444100	444213	.	-	.	ID=Dca5234.1.exon3;Parent=Dca5234.1
scaffold12	Augustus	exon	444677	444787	.	-	.	ID=Dca5234.1.exon4;Parent=Dca5234.1
scaffold12	Augustus	exon	444899	445048	.	-	.	ID=Dca5234.1.exon5;Parent=Dca5234.1
scaffold12	Augustus	exon	445179	445242	.	-	.	ID=Dca5234.1.exon6;Parent=Dca5234.1
scaffold12	Augustus	exon	445632	445745	.	-	.	ID=Dca5234.1.exon7;Parent=Dca5234.1
scaffold12	Augustus	exon	445902	445957	.	-	.	ID=Dca5234.1.exon8;Parent=Dca5234.1