Dca52344.1
Annotation
- 3-exons
- f-1
- sp|B2BXI1_ARALL#Gag-pol polymerase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=GagPol2#unknown#0F0P0C
- Repeat List (scaffold6891)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52344.1 |
18 |
145 |
232 |
24.13 |
128 |
38 |
2e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXI1_ARALL |
515 |
663 |
672 |
22.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52344.1 |
16 |
141 |
232 |
21.55 |
126 |
34 |
2e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0439900-01 |
162 |
312 |
421 |
35.86 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6891 |
Augustus |
mRNA |
8394 |
10433 |
. |
+ |
. |
ID=Dca52344.1;Parent=Dca52344 |
| scaffold6891 |
Augustus |
exon |
8394 |
8643 |
. |
+ |
. |
ID=Dca52344.1.exon1;Parent=Dca52344.1 |
| scaffold6891 |
Augustus |
exon |
8708 |
8920 |
. |
+ |
. |
ID=Dca52344.1.exon2;Parent=Dca52344.1 |
| scaffold6891 |
Augustus |
exon |
10198 |
10433 |
. |
+ |
. |
ID=Dca52344.1.exon3;Parent=Dca52344.1 |
