Carnation DB

Dca5238.1

Annotation

7-exons
f-1
sp|F6HJV6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0929g00020#GO:0005524;GO:0004674#2F0P0C
AT5G10520.1 | Symbols: RBK1 | ROP binding protein kinases 1 | chr5:3320584-3322649 REVERSE LENGTH=467
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5238.1	3	387	387	67.7	385	69	3e-151
Target_name	Start	End	Length	Cov(%)
sp\|F6HJV6_VITVI	108	486	486	77.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5238.1	3	387	387	58.65	385	59	2e-134
Target_name	Start	End	Length	Cov(%)
AT5G10520.1	89	467	467	81.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	475923	481776	.	-	.	ID=Dca5238.1;Parent=Dca5238
scaffold12	Augustus	exon	475923	476084	.	-	.	ID=Dca5238.1.exon1;Parent=Dca5238.1
scaffold12	Augustus	exon	476176	476325	.	-	.	ID=Dca5238.1.exon2;Parent=Dca5238.1
scaffold12	Augustus	exon	476488	476629	.	-	.	ID=Dca5238.1.exon3;Parent=Dca5238.1
scaffold12	Augustus	exon	476752	476831	.	-	.	ID=Dca5238.1.exon4;Parent=Dca5238.1
scaffold12	Augustus	exon	476934	477088	.	-	.	ID=Dca5238.1.exon5;Parent=Dca5238.1
scaffold12	Augustus	exon	477215	477475	.	-	.	ID=Dca5238.1.exon6;Parent=Dca5238.1
scaffold12	Augustus	exon	481563	481776	.	-	.	ID=Dca5238.1.exon7;Parent=Dca5238.1