Carnation DB

Dca52384.1

Annotation

6-exons
f-1
sp|F6HIR2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0042g00820#GO:0005634;GO:0003677;GO:0046983;GO:0003700;GO:0006351#3F1P1C
AT5G23260.2 | Symbols: TT16, ABS, AGL32 | K-box region and MADS-box transcription factor family protein | chr5:7836442-7838340 FORWARD LENGTH=252
Repeat List (scaffold69)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52384.1	1	222	224	49.55	222	47	2e-45
Target_name	Start	End	Length	Cov(%)
sp\|F6HIR2_VITVI	1	232	236	98.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52384.1	1	174	224	39.28	174	51	2e-42
Target_name	Start	End	Length	Cov(%)
AT5G23260.2	1	170	252	67.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold69	Augustus	mRNA	199756	203336	.	-	.	ID=Dca52384.1;Parent=Dca52384
scaffold69	Augustus	exon	199756	199909	.	-	.	ID=Dca52384.1.exon1;Parent=Dca52384.1
scaffold69	Augustus	exon	200505	200546	.	-	.	ID=Dca52384.1.exon2;Parent=Dca52384.1
scaffold69	Augustus	exon	200678	200719	.	-	.	ID=Dca52384.1.exon3;Parent=Dca52384.1
scaffold69	Augustus	exon	200988	201152	.	-	.	ID=Dca52384.1.exon4;Parent=Dca52384.1
scaffold69	Augustus	exon	201550	201634	.	-	.	ID=Dca52384.1.exon5;Parent=Dca52384.1
scaffold69	Augustus	exon	203152	203336	.	-	.	ID=Dca52384.1.exon6;Parent=Dca52384.1