Dca52386.1
Annotation
- 3-exons
- f-1
- sp|A5ARV9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_010143#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold69)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52386.1 |
19 |
1392 |
1519 |
34.29 |
1374 |
38 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ARV9_VITVI |
25 |
1342 |
1523 |
86.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52386.1 |
442 |
1390 |
1519 |
20.01 |
949 |
32 |
2e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1261 |
1401 |
63.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold69 |
Augustus |
mRNA |
214970 |
220939 |
. |
+ |
. |
ID=Dca52386.1;Parent=Dca52386 |
| scaffold69 |
Augustus |
exon |
214970 |
219169 |
. |
+ |
. |
ID=Dca52386.1.exon1;Parent=Dca52386.1 |
| scaffold69 |
Augustus |
exon |
220464 |
220497 |
. |
+ |
. |
ID=Dca52386.1.exon2;Parent=Dca52386.1 |
| scaffold69 |
Augustus |
exon |
220614 |
220939 |
. |
+ |
. |
ID=Dca52386.1.exon3;Parent=Dca52386.1 |
