Carnation DB

Dca52412.1

Annotation

18-exons
f-1
sp|B9T3C2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1750150#unknown#0F0P0C
AT4G27870.1 | Symbols: | Vacuolar iron transporter (VIT) family protein | chr4:13878983-13882679 FORWARD LENGTH=761
Repeat List (scaffold690)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52412.1	565	773	773	14.23	209	50	6e-54
Target_name	Start	End	Length	Cov(%)
sp\|B9T3C2_RICCO	366	580	580	37.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52412.1	178	271	773	4.78	94	40	4e-06
Target_name	Start	End	Length	Cov(%)
AT4G27870.1	198	287	761	11.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold690	Augus-PASA	mRNA	68246	74753	.	-	.	ID=Dca52412.1;Parent=Dca52412
scaffold690	Augus-PASA	exon	68246	68683	.	-	.	ID=Dca52412.1.exon1;Parent=Dca52412.1
scaffold690	Augus-PASA	exon	69017	69078	.	-	.	ID=Dca52412.1.exon2;Parent=Dca52412.1
scaffold690	Augustus	exon	69234	69440	.	-	.	ID=Dca52412.1.exon3;Parent=Dca52412.1
scaffold690	Augustus	exon	70280	70327	.	-	.	ID=Dca52412.1.exon4;Parent=Dca52412.1
scaffold690	Augustus	exon	70408	70458	.	-	.	ID=Dca52412.1.exon5;Parent=Dca52412.1
scaffold690	Augustus	exon	70566	70616	.	-	.	ID=Dca52412.1.exon6;Parent=Dca52412.1
scaffold690	Augustus	exon	70766	70840	.	-	.	ID=Dca52412.1.exon7;Parent=Dca52412.1
scaffold690	Augustus	exon	70952	71041	.	-	.	ID=Dca52412.1.exon8;Parent=Dca52412.1
scaffold690	Augustus	exon	71143	71220	.	-	.	ID=Dca52412.1.exon9;Parent=Dca52412.1
scaffold690	Augustus	exon	71327	71425	.	-	.	ID=Dca52412.1.exon10;Parent=Dca52412.1
scaffold690	Augustus	exon	71651	71695	.	-	.	ID=Dca52412.1.exon11;Parent=Dca52412.1
scaffold690	Augustus	exon	72256	72306	.	-	.	ID=Dca52412.1.exon12;Parent=Dca52412.1
scaffold690	Augustus	exon	72464	72508	.	-	.	ID=Dca52412.1.exon13;Parent=Dca52412.1
scaffold690	Augustus	exon	72601	72660	.	-	.	ID=Dca52412.1.exon14;Parent=Dca52412.1
scaffold690	Augustus	exon	72981	73034	.	-	.	ID=Dca52412.1.exon15;Parent=Dca52412.1
scaffold690	Augustus	exon	73363	73419	.	-	.	ID=Dca52412.1.exon16;Parent=Dca52412.1
scaffold690	Augustus	exon	73505	74035	.	-	.	ID=Dca52412.1.exon17;Parent=Dca52412.1
scaffold690	Augus-PASA	exon	74474	74753	.	-	.	ID=Dca52412.1.exon18;Parent=Dca52412.1