Carnation DB

Dca52414.1

Annotation

6-exons
f-1
sp|B9I2B7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_772586#unknown#0F0P0C
Os02t0106700-01 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 domain containing protein.
Repeat List (scaffold690)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52414.1	8	401	401	56.6	394	52	9e-118
Target_name	Start	End	Length	Cov(%)
sp\|B9I2B7_POPTR	7	432	433	98.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52414.1	8	401	401	50.87	394	49	4e-113
Target_name	Start	End	Length	Cov(%)
Os02t0106700-01	76	485	487	84.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold690	Augustus	mRNA	82734	84582	.	-	.	ID=Dca52414.1;Parent=Dca52414
scaffold690	Augustus	exon	82734	82814	.	-	.	ID=Dca52414.1.exon1;Parent=Dca52414.1
scaffold690	Augustus	exon	82890	82985	.	-	.	ID=Dca52414.1.exon2;Parent=Dca52414.1
scaffold690	Augustus	exon	83240	83351	.	-	.	ID=Dca52414.1.exon3;Parent=Dca52414.1
scaffold690	Augustus	exon	83466	84181	.	-	.	ID=Dca52414.1.exon4;Parent=Dca52414.1
scaffold690	Augustus	exon	84282	84417	.	-	.	ID=Dca52414.1.exon5;Parent=Dca52414.1
scaffold690	Augustus	exon	84518	84582	.	-	.	ID=Dca52414.1.exon6;Parent=Dca52414.1